1472
A species and build agnostic version of gemini.
Blog post from describing a new GEMINI for any species / genome build. Ready for public use and feedback!
from twitter_favs
3 days ago
Twitter
RT : Reproductive Maturation in Geoduck clams (Panopea generosa):

biology  physiology  marine  from twitter_favs
5 days ago
Twitter
Fishackathon. Why are we here?? Just for the halibut!!!
codeforfish  sea  from twitter_favs
13 days ago
dat
Next tool plug from : dat
Think git + bittorrent, aimed at scientific data.
openscience  from twitter_favs
13 days ago
Twitter
Ten simple rules for managing high-throughput nucleotide by
sequencing  data  from twitter_favs
15 days ago
Twitter
And here's some code to help make those:
rstats  from twitter_favs
22 days ago
PhyloPic — Free Silhouette Images of Life Forms
Fabulous resource for animal silhouette images for your plots at
from twitter_favs
28 days ago
Twitter
Fabulous resource for animal silhouette images for your plots at
from twitter_favs
28 days ago
Canvas
This new collaborative (markdown) editor looks nice.
from twitter_favs
5 weeks ago
Towards standa
RT : Good intro to sharing computer code on (despite title, not just for neuroscience)
openscience  from twitter_favs
5 weeks ago
List | Diversify EEB
There's a new tool to help with this problem!
from twitter_favs
5 weeks ago
Twitter
There's a new tool to help with this problem!
from twitter_favs
5 weeks ago
Chinese Undergraduates in the United States
Our new post on “Writing a Data Management Plan” is now live via at
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5 weeks ago
Twitter
What DNA methylation does in a coral: our new preprint
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7 weeks ago
Twitter
RT : The Bevan Series 2016 symposium to honor Lobo Orensanz on Climate, Ecology, and Fisheries for Invertebrates. RSVP!
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8 weeks ago
Trimming of sequence reads alters RNA-Seq gene expression estimates | BMC Bioinformatics | Full Text
Effects of read trimming on RNA-Seq analysis more evidence that Tic Tac thresholds are dangerous.
from twitter_favs
10 weeks ago
NextflowWorkbench: Reproducible and Reusable Workflows for Beginners and Experts | bioRxiv
bioArXiv_ NextflowWorkbench: Reproducible and Reusable Workflows for Beginners and Experts
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10 weeks ago
Introducing Vega-Lite — Medium
Vega-lite 1.0 just released by ! Looks really nice:
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10 weeks ago
Twitter
shirts now available (XX) (XY) fully customizable
pr33p  from twitter_favs
10 weeks ago
PR33PS FTW T-SHIRT | Zazzle
shirts now available (XX) (XY) fully customizable
pr33p  from twitter_favs
10 weeks ago
PR33PS FTW T-SHIRT | Zazzle
shirts now available (XX) (XY) fully customizable
pr33p  from twitter_favs
10 weeks ago
Twitter
"Share Impressively": Slides + thoughts from my talk on reproducibility. Comments welcome!
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january 2016
Slides and some thoughts on a talk about reproducibility - rOpenSci Discuss
"Share Impressively": Slides + thoughts from my talk on reproducibility. Comments welcome!
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january 2016
(500) http://www.nature.com/nature/journal/vaop/ncurrent/full/nature16547.html
Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions
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january 2016
Twitter
QuickRNASeq RNA-seq data analysis automation + interactive visualization
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january 2016
timdavies/trunk · GitHub
Trunk is a simple, web-based notes app that stores notes as Markdown and can be self-hosted
opensource  from twitter_favs
january 2016
Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences - F1000Research
Looking fwd to reading! Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences
from twitter_favs
december 2015
Mobile DNA | Full text | Transposable element detection from whole genome sequence data
Nice review by Ewing on “Transposable element detection from whole genome sequence data” ()
from twitter_favs
december 2015
What’s in a journal name? : Nature News & Comment
Would deleting journal names from publication lists encourage papers to be judged on merit?
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december 2015
Twitter
Would deleting journal names from publication lists encourage papers to be judged on merit?
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december 2015
Researchers embrace and reap benefits of Electronic Lab Notebooks
Researchers @ UW-Madison embrace and reap benefits of Electronic Lab Notebooks via
from twitter_favs
october 2015
binder
Convert a GitHub repo of Jupyter notebooks into an executable environment:
from twitter_favs
october 2015
New RNA-Seq Methods and Alorithms (2015 iPlant Workshop @ UC Davis) - YouTube
Check out video of new RNA-seq methods and algorithms from an iPlant workshop with :
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october 2015
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