1215
The RIDL hypothesis: transposable elements as functional... [RNA. 2014] - PubMed - NCBI
Reading this paper that proposes as functional domains for lncRNAs (since lncRNAs are full of TEs)
transposons  from twitter_favs
7 days ago
Starting data analysis/wrangling with R: Things I wish I'd been told
Starting data analysis/wrangling with R: Things I wish I'd been told -
from twitter_favs
7 days ago
Working with RStudio, Git, GitHub
Great detailed instructions & pointers for working w RStudio, Git & GitHub from
from twitter_favs
13 days ago
Within- and Between-Litter Maternal Care Alte... [Behav Neurosci. 2014] - PubMed - NCBI
A mother's love: new study shows significantly higher methylation in rat pups exposed to more licking & grooming
DNA  from twitter_favs
20 days ago
Building a community - how? (with tweets) · ctitusbrown · Storify
Now I can be more specific - what's low-maint way to build & maintain a community presence for academics? See
from twitter_favs
20 days ago
Pelsue Lab | The Laboratory of Stephen C. Pelsue, Ph.D.
Pelsue Lab site () coming together. Structure set up and some content. We are very excited. Thx
from twitter_favs
28 days ago
Untitled (http://arxiv.org/pdf/1409.0798v1.pdf)
Interesting read: Datahub - a proposed dataset version control system in the same ilk as git and :
from twitter_favs
28 days ago
Advanced NCBI
I gave a talk titled "Advanced NCBI" at this morning. I think I killed my students.
from twitter_favs
29 days ago
Pipes and Filters
Unix pipes and filters beautifully explained by |
from twitter_favs
5 weeks ago
eTBLAST 3.0
eTBLAST: a text-similarity based search engine
bioinformatics  biology  search  text  database  citations  journal  finder 
5 weeks ago
Is lecturing ethical? (with tweets) · mwilsonsayres · Storify
Is lecturing ethical? Storify of Scott Freeman's interactive seminar:
from twitter_favs
5 weeks ago
Teaching Materials | LANGMEAD LAB @ JHU
People teaching bioinformatics to CS audience: you NEED to see this awesome resource from @BenLangmead
bioinformatics  slides  teaching 
6 weeks ago
Untitled (http://journal.frontiersin.org/Journal/10.3389/fgene.2014.00324/abstract)
Nice overview from : Statistical methods for detecting differentially methylated loci and regions
from twitter_favs
7 weeks ago
Performing exploratory analysis in Python (using Pandas)
Performing exploratory analysis in Python (using Pandas) -
from twitter_favs
8 weeks ago
Git tutorial
Several of my colleagues pledged they'd finally start using git and after I gave this intro tutorial today
from twitter_favs
8 weeks ago
(401) http://www.nature.com/nrg/journal/vaop/ncurrent/full/nrg3772.html
Advances in the profiling of DNA modifications: cytosine methylation and beyond
from twitter_favs
8 weeks ago
(401) http://www.nature.com/nrg/journal/vaop/ncurrent/full/nrg3819.html
Pathogen genetics: Exploring gene function and parasite-host protein interactions
from twitter_favs
8 weeks ago
Top 5 bash commands for handling data – Code, Think, Write
New on the blog: Bioinformaticians gotta love bash. My top 5 commands line tricks for handling data
datascience  data  bash  terminal  commads  commandline  from twitter_favs
8 weeks ago
(500) http://journal.frontiersin.org/Journal/10.3389/fgene.2014.00293/abstract
A bioinformatics workflow for detecting signatures of selection in genomic data: Murray Cadzo...
genetics  genes  from twitter_favs
8 weeks ago
Untitled (http://genomebiology.com/content/pdf/s13059-014-0408-0.pdf)
RT : In the end, seems that nobody knows what´s happening with methylation in gene bodies...
from twitter_favs
8 weeks ago
Making Your Code Citable · GitHub Guides
Making your code citeable - a tutorial explaining how to cite GitHub repositories in academic literature via DOI
from twitter_favs
8 weeks ago
Finding nodes in Anopheles gambiae pathways with IUPAC names | chem-bla-ics
Egon Willighagen: Finding nodes in Anopheles gambiae pathways with IUPAC names
from twitter_favs
8 weeks ago
Hang0ut - Faster access to Google Hangouts
Unsure why G+ makes it so cumbersome to start a video chat. This helps:
from twitter_favs
8 weeks ago
Twitter / SolomonRDavid: Jasonowicz: Alaskan & W.Coast ...
RT : Jasonowicz: Alaskan & W.Coast pop genetics VERY similar across large geographic range.
sablefish  AFS14  from twitter_favs
9 weeks ago
runemadsen/ipython-notebox · GitHub
iPython Notebook Vagrant Box - A simple skeleton for easily running iPython Notebooks on a local machine:
from twitter_favs
9 weeks ago
Untitled (http://www.washacad.org/about/news/Press_releases/wsas_PR_2014_New_members_7_18_14.pdf)
RT : Affiliate Robin Waples and our fearless director Andre Punt () both elected to WA State Academy of Sciences
from twitter_favs
11 weeks ago
Ecology of Infectious Marine Diseases [course]
RT : Really impressed with the open notebooks being kept by 's students as a matter of course
openscience  from twitter_favs
11 weeks ago
Exploratory computing with Python by Mark Bakker
Exploratory computing with Python: a beautiful self-contained course as IPython notebooks, by M. Bakker of U. Delft:
from twitter_favs
12 weeks ago
Genome Biology | Abstract | Corset: enabling differential gene expression analysis for
Corset: differential gene expression analysis for de novo assembled transcriptomes
from twitter_favs
12 weeks ago
308-L 2012 | The official website of Physics 308-L
I taught an electronics course with various platforms curated here peruse at will!
opennotebook  from twitter_favs
july 2014
Evolutionary rescue in a changing world
Really cool review of "evolutionary rescue" where populations can be saved from extinction as they adapt to pressures
from twitter_favs
july 2014
Talk notes for the Bioinformatics Open Source Conference (2014)
RT : My (longskim) notes for "A History of Bioinformatics (in 2039)" available here:
bosc2014  from twitter_favs
july 2014
compBiomeBlog: R: Using RColorBrewer to colour your figures in R
Bookmarked: compBiomeBlog: R: Using RColorBrewer to colour your figures in R
from twitter_favs
july 2014
KEGGscape: a Cytoscape app for pathway data integration - F1000Research
KEGGscape: a Cytoscape app for pathway data integration. Nishida K et al., published by ,
paper  cytoscape  pathway  tools  Kegg  visualization  from twitter_favs
july 2014
Tedna: a transposable element de novo assembler
Tedna: de novo assembler of transposons. Compared to Velvet, Oases and RepeatExplorer using Wheat & Arabidopsis
from twitter_favs
july 2014
The epigenome of Trypanosoma brucei: A regulatory interface to an unconventional transcriptional machine | Jp Maree - Academia.edu
A regulatory interface to an unconventional transcriptional machine: Searching... The epigenome of Trypanosoma...
from twitter_favs
june 2014
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