1378
Hybrid mimics and hybrid vigor in Arabidopsis
PNAS article on Arabidopsis hybrid vigor suggests F1 mods as a culprit -CW
epigenetic  from twitter_favs
14 days ago
(503) http://seqanswers.com/forums/showthread.php?t=61936
"Why are the first few bases of Illumina HiSeq reads of lower quality?"
seqanswers  from twitter_favs
16 days ago
About
Miller is like sed, awk, cut, join, and sort for name-indexed data such as CSV
from twitter_favs
18 days ago
Galaxy Integrated Omics: Web-based standards-compliant workflows for proteomics informed by transcriptomics. - PubMed - NCBI
Galaxy Integrated Omics: Web-based standards-compliant workflows for proteomics informed by transcriptomics
from twitter_favs
18 days ago
Project everware: Reusable science - Tim Head
everware: reusable science jupyterhub + docker (~ an executable version of nbviewer). seems cool!
from twitter_favs
19 days ago
Untitled (https://peerj.com/preprints/1287/)
New: "An optimization approach to detect differentially methylated regions from Whole Genome Bisulfite Seq. data"
from twitter_favs
26 days ago
Applications · iobio
Stunning bioinformatics web applications from the Marth Lab: (OSS, MIT license)
from twitter_favs
28 days ago
Epigenetics & Chromatin | Full text | The BisPCR
New in Epigenetics & Chromatin: robust, efficient & cost-effective technique for targeted bisulfite NGS! Read more:
from twitter_favs
4 weeks ago
Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements. - PubMed - NCBI
Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements.
from twitter_favs
6 weeks ago
Detection of differentially methylated regions from whole-genome bisulfite sequencing data without replicates
Methods! NAR j: "Detectn of difntly methyltd regions fr whole-genome bisulf seq data w/o replicates” -CW
epigenetics  from twitter_favs
6 weeks ago
Epigenetic inheritance through the female germ-line: The known, the unknown, and the possible. - PubMed - NCBI
Epigenetic inheritance through the female germ-line: The known, the unknown, and the possible.
from twitter_favs
6 weeks ago
Read count-based method for high-throughput allelic genotyping of transposable elements and structural variants. - PubMed - NCBI
Read count-based method for high-throughput allelic genotyping of transposable elements and structural variants.
from twitter_favs
7 weeks ago
Untitled (http://www.gigasciencejournal.com/content/pdf/s13742-015-0070-9.pdf)
SMAP: a streamlined methylation analysis
pipeline for bisulfite sequencing
from twitter_favs
7 weeks ago
Transgenerational Epigenetic Inheritance: myths and mechanisms
RT : Martienssen Transgenerational epigenetic inheritance: myths and mechanisms.
ICAR2015  from twitter_favs
7 weeks ago
The MEME Suite
The MEME Suite for motif analysis
from twitter_favs
8 weeks ago
Targeted capture in evolutionary and ecological genomics - Jones - Molecular Ecology - Wiley Online Library
Targeted capture in evo/eco genomics This is my jam! I've used it in 4 phyla. It could be your jam too, take a look.
from twitter_favs
8 weeks ago
Bandage: interactive visualisation of de novo genome assemblies
Bandage: interactive visualisation of de novo genome assemblies
from twitter_favs
8 weeks ago
Non-Coding RNAs in Transcriptional Regulation: The review for Current Molecular Biology Reports. - PubMed - NCBI
[pubmed trending] Non-Coding RNAs in Transcriptional Regulation: The review for Current Molecular Biology Reports.
from twitter_favs
9 weeks ago
Epigenetics News - Biotech 365Biotech 365
Wanderer, an interactive viewer to explore DNA methylation and gene expres...
epigenetics  from twitter_favs
10 weeks ago
Visualizing biological data: exploratory bioinformatics with plot.ly | IPython Notebooks | plotly
My small contribution to plot.ly notebooks: Visualizing biological data: exploratory bioinformatics with plot.ly
ipython  data  visualization  plotly  bioinformatics 
12 weeks ago
The Journal of Brief Ideas
Managed to add in attachments to before the end of . Check it out!
mozsprint  from twitter_favs
12 weeks ago
Transgenerational phenotypic and epigenetic changes in response to heat stress in Arabidopsis thaliana. - PubMed - NCBI
Transgenerational phenotypic and epigenetic changes in response to heat stress in Arabidopsis thaliana.
from twitter_favs
12 weeks ago
jennybc/googlesheets · GitHub
. thx for googlesheets R package. tried it for first time today, great stuff!
from twitter_favs
june 2015
Webinar: Genome Annotation with MAKER-P - YouTube
Watch our webinar on Genome Annotation with MAKER-P! Learn about components of MAKER and how to handle its output:
from twitter_favs
june 2015
Get credit for peer review | Publons
Would state that here but is hidden as we don't have DOI for article.
from twitter_favs
may 2015
tessington/PNASForageFish · GitHub
RT : "Fishing amplifies forage fish population collapses" + & code+data on
from twitter_favs
may 2015
Fishing amplifies forage fish population collapses
RT : "Fishing amplifies forage fish population collapses" + & code+data on
from twitter_favs
may 2015
Untitled (https://peerj.com/articles/970/)
PANDA: pathway and annotation explorer for visualizing and interpreting gene-centric data
from twitter_favs
may 2015
National Data Integrity Conference - Making the web work for science
"Bake reproducible practices into the fabric of research." Great takeaway from 's talk at
dataintegrity15  from twitter_favs
may 2015
Untitled (http://elifesciences.org/content/4/e05255)
RT : Nordborg lab: "DNA methylation in Arabidopsis has a genetic basis and shows evidence of local adaptation"
from twitter_favs
may 2015
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